fork/minimap2
1
0
Fork 0
mirror of https://github.com/lh3/minimap2.git synced 2026-10-05 21:58:11 +08:00
Code Issues Packages Projects Releases Wiki Activity

clarify multi-part index in option -I (#301)

Browse Source
This commit is contained in:
Heng Li
2022-06-13 15:50:15 -04:00
parent 50a26a60a6
commit 767556b6f0
1 changed files with 3 additions and 2 deletions
Download Patch File Download Diff File Expand all files Collapse all files
minimap2.1
+3 -2
View File
@@ -94,10 +94,11 @@ bases in
.IR target.fa , .IR target.fa ,
minimap2 needs to read minimap2 needs to read
.I query.fa .I query.fa
multiple times to map it against each batch of target sequences. multiple times to map it against each batch of target sequences. This would create a multi-part index.
.I NUM .I NUM
may be ending with k/K/m/M/g/G. NB: mapping quality is incorrect given a may be ending with k/K/m/M/g/G. NB: mapping quality is incorrect given a
multi-part index. multi-part index. See also option
.BR --split-prefix .
.TP .TP
.B --idx-no-seq .B --idx-no-seq
Don't store target sequences in the index. It saves disk space and memory but Don't store target sequences in the index. It saves disk space and memory but