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revert to fixed band

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This commit is contained in:
Heng Li
2017-06-14 14:22:23 -04:00
parent d3f17b1e05
commit 78fe89d1ab
2 changed files with 24 additions and 1 deletions
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ksw2.h
+5 -1
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@@ -1,6 +1,8 @@
#ifndef KSW2_H_
#define KSW2_H_
#include <stdint.h>
#ifdef __cplusplus
extern "C" {
#endif
@@ -23,7 +25,9 @@ extern "C" {
*
* @return score of the alignment
*/
int ksw_global(void *km, int qlen, const uint8_t *query, int tlen, const uint8_t *target, int m, const int8_t *mat, int gapo, int gape, int w, int *n_cigar_, uint32_t **cigar_);
int ksw_global(void *km, int qlen, const uint8_t *query, int tlen, const uint8_t *target, int m, const int8_t *mat, int gapo, int gape, int w, int *n_cigar, uint32_t **cigar);
void ksw_gen_simple_mat(int m, int8_t *mat, int8_t a, int8_t b);
#ifdef __cplusplus
}