fork/minimap2
1
0
Fork 0
mirror of https://github.com/lh3/minimap2.git synced 2026-10-02 19:58:12 +08:00
Code Issues Packages Projects Releases Wiki Activity

dev-r1087: added --cap-kalloc

Browse Source
This commit is contained in:
Heng Li
2021-07-19 21:20:04 -04:00
parent c4fe52fb07
commit 7e33fde82b
3 changed files with 7 additions and 2 deletions
Download Patch File Download Diff File Expand all files Collapse all files
main.c
+3 -1
View File
@@ -7,7 +7,7 @@
#include "mmpriv.h"
#include "ketopt.h"
#define MM_VERSION "2.21-dev-r1084-dirty"
#define MM_VERSION "2.21-dev-r1087-dirty"
#ifdef __linux__
#include <sys/resource.h>
@@ -73,6 +73,7 @@ static ko_longopt_t long_options[] = {
{ "mask-len", ko_required_argument, 346 },
{ "rmq", ko_optional_argument, 347 },
{ "qstrand", ko_no_argument, 348 },
{ "cap-kalloc", ko_required_argument, 349 },
{ "help", ko_no_argument, 'h' },
{ "max-intron-len", ko_required_argument, 'G' },
{ "version", ko_no_argument, 'V' },
@@ -227,6 +228,7 @@ int main(int argc, char *argv[])
else if (c == 345) opt.alt_drop = atof(o.arg); // --alt-drop
else if (c == 346) opt.mask_len = mm_parse_num(o.arg); // --mask-len
else if (c == 348) opt.flag |= MM_F_QSTRAND | MM_F_NO_INV; // --qstrand
else if (c == 349) opt.cap_kalloc = mm_parse_num(o.arg); // --cap-kalloc
else if (c == 330) {
fprintf(stderr, "[WARNING] \033[1;31m --lj-min-ratio has been deprecated.\033[0m\n");
} else if (c == 314) { // --frag