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r703: added --max-clip-ratio

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still testing the option
This commit is contained in:
Heng Li
2018-02-12 13:29:18 -05:00
parent f66de7df59
commit 7ef5490884
7 changed files with 12 additions and 6 deletions
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align.c
+1 -1
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@@ -720,7 +720,7 @@ mm_reg1_t *mm_align_skeleton(void *km, const mm_mapopt_t *opt, const mm_idx_t *m
*n_regs_ = n_regs;
kfree(km, qseq0[0]);
kfree(km, ez.cigar);
mm_filter_regs(km, opt, n_regs_, regs);
mm_filter_regs(km, opt, qlen, n_regs_, regs);
mm_hit_sort_by_dp(km, n_regs_, regs);
return regs;
}