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r1298: fixed out-of-bound local alignment
I believe this would not lead to memory violation; it may occasionally include a few base beyond the intended alignment start/end.
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@@ -5,7 +5,7 @@
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#include <stdio.h>
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#include <sys/types.h>
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#define MM_VERSION "2.30-r1290-dirty"
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#define MM_VERSION "2.30-r1298-dirty"
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#define MM_F_NO_DIAG (0x001LL) // no exact diagonal hit
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#define MM_F_NO_DUAL (0x002LL) // skip pairs where query name is lexicographically larger than target name
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