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r888: fixed incorrect CIGAR when --eqx in use

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This was caused by mm_fix_cigar() which may change query/target offset in very
rare cases. Generating EQX has to beware of this change.

Resolves #266
This commit is contained in:
Heng Li
2018-11-18 14:22:29 -05:00
parent 62bbadf668
commit 83a8ee7038
2 changed files with 76 additions and 77 deletions
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main.c
+1 -1
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@@ -6,7 +6,7 @@
#include "mmpriv.h"
#include "ketopt.h"
#define MM_VERSION "2.14-r886-dirty"
#define MM_VERSION "2.14-r888-dirty"
#ifdef __linux__
#include <sys/resource.h>