fork/minimap2
1
0
Fork 0
mirror of https://github.com/lh3/minimap2.git synced 2026-10-10 07:40:55 +08:00
Code Issues Packages Projects Releases Wiki Activity

r447: paired-end mapping quality

Browse Source 
not as good as I would hope...
This commit is contained in:
Heng Li
2017-09-27 15:39:25 -04:00
parent 7e0d70bfd3
commit 9541052564
3 changed files with 35 additions and 20 deletions
Download Patch File Download Diff File Expand all files Collapse all files
mmpriv.h
+1 -1
View File
@@ -80,7 +80,7 @@ void mm_set_mapq(int n_regs, mm_reg1_t *regs, int min_chain_sc, int match_sc, in
mm_seg_t *mm_seg_gen(void *km, int n_segs, const int *qlens, int n_regs0, const mm_reg1_t *regs0, int *n_regs, mm_reg1_t **regs, const mm128_t *a);
void mm_seg_free(void *km, int n_segs, mm_seg_t *segs);
void mm_pair(void *km, int max_gap_ref, int dp_bonus, const int *qlens, int *n_regs, mm_reg1_t **regs);
void mm_pair(void *km, int max_gap_ref, int dp_bonus, int sub_diff, int match_sc, const int *qlens, int *n_regs, mm_reg1_t **regs);
#ifdef __cplusplus
}