diff --git a/python/cmappy.pxd b/python/cmappy.pxd index 47855fe..05bb7a9 100644 --- a/python/cmappy.pxd +++ b/python/cmappy.pxd @@ -39,7 +39,7 @@ cdef extern from "minimap.h": int transition int sc_ambi int noncan - int junc_bonus + int junc_bonus, junc_pen int zdrop, zdrop_inv int end_bonus int min_dp_max