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r1290: support ds in Python

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Heng Li
2025-12-12 11:39:01 -05:00
parent bd0cba5012
commit 9bb4d2bed4
7 changed files with 35 additions and 14 deletions
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python/cmappy.pxd
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@@ -112,6 +112,7 @@ cdef extern from "minimap.h":
void mm_tbuf_destroy(mm_tbuf_t *b)
void *mm_tbuf_get_km(mm_tbuf_t *b)
int mm_gen_cs(void *km, char **buf, int *max_len, const mm_idx_t *mi, const mm_reg1_t *r, const char *seq, int no_iden)
int mm_gen_ds(void *km, char **buf, int *max_len, const mm_idx_t *mi, const mm_reg1_t *r, const char *seq, int no_iden)
int mm_gen_MD(void *km, char **buf, int *max_len, const mm_idx_t *mi, const mm_reg1_t *r, const char *seq)
#