r490: improved short-read extension heuristic

Now we find the best scoring ungapped seeded segment and then extend from it. There is no gap filling for short reads.
2026-09-30 21:58:12 +08:00 · 2017-10-08 21:36:34 -04:00
parent f9415628a8
commit 9fea4d16b3
3 changed files with 93 additions and 46 deletions
@@ -6,7 +6,7 @@
 #include "mmpriv.h"
 #include "getopt.h"

-#define MM_VERSION "2.2-r489-dirty"
+#define MM_VERSION "2.2-r490-dirty"

 #ifdef __linux__
 #include <sys/resource.h>