r206: mapq penalize short chains further

The old code penalized at the log() scale. Now added a linear-scaled factor. If the chain consists of few minimizers, its quality is really not good.
2026-09-30 14:08:12 +08:00 · 2017-07-26 11:50:04 -04:00
parent e9dc1ce2b6
commit a01d758af6
2 changed files with 5 additions and 3 deletions
@@ -8,7 +8,7 @@
 #include "minimap.h"
 #include "mmpriv.h"

-#define MM_VERSION "2.0-r205-dirty"
+#define MM_VERSION "2.0-r206-dirty"

 void liftrlimit()
 {