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r176: removed seedcov_ratio; changed default opt

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min_seedcov_ratio is not used
This commit is contained in:
Heng Li
2017-07-12 12:47:46 -04:00
parent 52caf79395
commit b4280d186f
5 changed files with 26 additions and 29 deletions
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map.c
-1
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@@ -20,7 +20,6 @@ void mm_mapopt_init(mm_mapopt_t *opt)
opt->bw = 500;
opt->max_gap = 5000;
opt->max_chain_skip = 25;
opt->min_seedcov_ratio = 0.0f;
opt->mask_level = 0.5f;
opt->pri_ratio = 0.8f;