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make multi

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Saurabh
2021-11-27 10:42:22 -05:00
committed by Heng Li
parent 03540c47b3
commit bedd87f61f
4 changed files with 35 additions and 8 deletions
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Makefile
+16
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@@ -45,6 +45,11 @@ PROG= minimap2
PROG_EXTRA= sdust minimap2-lite
LIBS= -lm -lz -lpthread
CC=$(CXX)
ifeq ($(CC), g++)
CC=g++ -std=c++11
endif
ifeq ($(arm_neon),) # if arm_neon is not defined
ifeq ($(sse2only),) # if sse2only is not defined
OBJS+=ksw2_extz2_sse41.o ksw2_extd2_sse41.o ksw2_exts2_sse41.o ksw2_extz2_sse2.o ksw2_extd2_sse2.o ksw2_exts2_sse2.o ksw2_dispatch.o ksw2_extd2_avx.o
@@ -93,6 +98,17 @@ libminimap2.a:$(OBJS)
sdust:sdust.c kalloc.o kalloc.h kdq.h kvec.h kseq.h ketopt.h sdust.h
$(CC) -D_SDUST_MAIN $(CFLAGS) $< kalloc.o -o $@ -lz
multi:
$(MAKE) clean
$(MAKE)
mv minimap2 mm2-fast
$(MAKE) clean
$(MAKE) lhash=1
mv minimap2 mm2-fast-lhash
$(MAKE) clean
$(MAKE) no_opt=1
mv minimap2 mm2-fast-no-opt
# SSE-specific targets on x86/x86_64
ifeq ($(arm_neon),) # if arm_neon is defined, compile this target with the default setting (i.e. no -msse2)