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make multi

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This commit is contained in:
Saurabh
2021-11-27 10:42:22 -05:00
committed by Heng Li
parent 03540c47b3
commit bedd87f61f
4 changed files with 35 additions and 8 deletions
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seed.c
+6 -6
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@@ -13,9 +13,9 @@ extern uint64_t minimizer_lookup_time;
mm_seed_t *mm_seed_collect_all(void *km, const mm_idx_t *mi, const mm128_v *mv, int32_t *n_m_)
{
#ifdef MANUAL_PROFILING
uint64_t lookup_start = __rdtsc();
#endif
//#ifdef MANUAL_PROFILING
// uint64_t lookup_start = __rdtsc();
//#endif
#ifdef LISA_HASH
//-----------------------------------
@@ -65,9 +65,9 @@ mm_seed_t *mm_seed_collect_all(void *km, const mm_idx_t *mi, const mm128_v *mv,
free(lisa_pos);
#endif
*n_m_ = k;
#ifdef MANUAL_PROFILING
minimizer_lookup_time += __rdtsc() - lookup_start;
#endif
//#ifdef MANUAL_PROFILING
// minimizer_lookup_time += __rdtsc() - lookup_start;
//#endif
return m;
}