r372: default mm_verbose to 1, and change in main

This commit is contained in:
Heng Li
2017-09-16 09:14:34 -04:00
parent 446bde214d
commit c07f9f9a49
4 changed files with 12 additions and 4 deletions

View File

@@ -1,4 +1,9 @@
from setuptools import setup, Extension
try:
from setuptools import setup, Extension
except ImportError:
from distutils.core import setup
from distutils.extension import Extension
from Cython.Build import cythonize
import sys
@@ -16,6 +21,6 @@ setup(
['python/minimap2.pyx', 'align.c', 'bseq.c', 'chain.c', 'format.c', 'hit.c', 'index.c', 'kalloc.c',
'ksw2_extd2_sse.c', 'ksw2_exts2_sse.c', 'ksw2_extz2_sse.c', 'ksw2_ll_sse.c', 'kthread.c', 'map.c',
'misc.c', 'sdust.c', 'sketch.c'],
extra_compile_args = ['-msse4'],
extra_compile_args = ['-msse4'], # WARNING: ancient x86_64 CPUs don't have SSE4
include_dirs = ['.'])])
)