r938: added --sam-hit-only; resolved #377

2026-10-06 01:18:11 +08:00 · 2019-04-30 22:40:36 -04:00
parent 97f67a2a0a
commit c2aec88b84
4 changed files with 8 additions and 2 deletions
@@ -35,6 +35,7 @@
 #define MM_F_PAF_NO_HIT    0x8000000 // output unmapped reads to PAF
 #define MM_F_NO_END_FLT    0x10000000
 #define MM_F_HARD_MLEVEL   0x20000000
+#define MM_F_SAM_HIT_ONLY  0x40000000

 #define MM_I_HPC          0x1
 #define MM_I_NO_SEQ       0x2