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Heng Li
2017-06-29 11:11:15 -04:00
parent 9fbf7e41e1
commit c8d122bcdb
5 changed files with 22 additions and 9 deletions
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chain.c
+4 -3
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@@ -19,9 +19,10 @@ static inline int ilog2_32(uint32_t v)
return (t = v>>8) ? 8 + LogTable256[t] : LogTable256[v];
}
int mm_chain_dp(int max_dist, int bw, int max_skip, int min_cnt, int min_sc, int n, mm128_t *a, uint64_t **_u, void *km)
{
int32_t st = 0, i, j, k, *f, *p, *t, *v, n_u, n_v;
int mm_chain_dp(int max_dist, int bw, int max_skip, int min_cnt, int min_sc, int64_t n, mm128_t *a, uint64_t **_u, void *km)
{ // TODO: make sure this works when n has more than 32 bits
int32_t st = 0, j, k, *f, *p, *t, *v, n_u, n_v;
int64_t i;
uint64_t *u;
mm128_t *b;