@@ -36,6 +36,14 @@
extern "C" {
#endif
typedef struct {
uint32_t n;
uint32_t q_pos;
uint32_t q_span:31, flt:1;
uint32_t seg_id:31, is_tandem:1;
const uint64_t *cr;
} mm_seed_t;
int n_u, n_a;
uint64_t *u;
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