more functional minimap2.py; added categories

This commit is contained in:
Heng Li
2017-09-17 17:06:39 -04:00
parent 0b660c70e2
commit cf93e5c0a1
5 changed files with 43 additions and 7 deletions
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@@ -1,4 +1,4 @@
.TH minimap2 1 "14 September 2017" "minimap2-2.1.1-r364-dirty" "Bioinformatics tools"
.TH minimap2 1 "17 September 2017" "minimap2-2.1.1-r402-dirty" "Bioinformatics tools"
.SH NAME
.PP
minimap2 - mapping and alignment between collections of DNA sequences
@@ -398,6 +398,7 @@ NM i Total number of mismatches and gaps in the alignment
AS i DP alignment score
ms i DP score of the max scoring segment in the alignment
nn i Number of ambiguous bases in the alignment
ts A Transcript strand (splice mode only)
cg Z CIGAR string (only in PAF)
.TE