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more functional minimap2.py; added categories

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Heng Li
2017-09-17 17:06:39 -04:00
parent 0b660c70e2
commit cf93e5c0a1
5 changed files with 43 additions and 7 deletions
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15
setup.py
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@@ -23,14 +23,15 @@ def readme():
setup(
name = 'mappy',
version = '2.2rc0',
version = '2.2rc1',
url = 'https://github.com/lh3/minimap2',
description = 'Minimap2 python binding',
long_description = readme(),
author = 'Heng Li',
author_email = 'lh3@me.com',
license = 'MIT',
keywords = ['bioinformatics', 'sequence-alignment'],
keywords = 'sequence-alignment',
scripts = ['python/minimap2.py'],
ext_modules = [Extension('mappy',
sources = [module_src, 'align.c', 'bseq.c', 'chain.c', 'format.c', 'hit.c', 'index.c',
'ksw2_extd2_sse.c', 'ksw2_exts2_sse.c', 'ksw2_extz2_sse.c', 'ksw2_ll_sse.c',
@@ -41,4 +42,14 @@ setup(
extra_compile_args = ['-msse4'], # WARNING: ancient x86_64 CPUs don't have SSE4
include_dirs = ['.'],
libraries = ['z', 'm', 'pthread'])],
classifiers = [
'Development Status :: 4 - Beta',
'License :: OSI Approved :: MIT License',
'Operating System :: POSIX',
'Programming Language :: C',
'Programming Language :: Cython',
'Programming Language :: Python :: 2.7',
'Programming Language :: Python :: 3',
'Intended Audience :: Science/Research',
'Topic :: Scientific/Engineering :: Bio-Informatics'],
cmdclass = cmdclass)