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Heng Li
2017-06-29 12:58:52 -04:00
parent c8d122bcdb
commit d274e1b743
7 changed files with 71 additions and 13 deletions
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Makefile
+2 -1
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@@ -3,7 +3,7 @@ CFLAGS= -g -Wall -O2 -Wc++-compat -Wno-unused-function
CPPFLAGS= -DHAVE_KALLOC
INCLUDES= -I.
OBJS= kalloc.o kthread.o misc.o bseq.o sketch.o chain.o align.o sdust.o \
index.o format.o map.o ksw2_extz2_sse.o
index.o patch.o format.o map.o ksw2_extz2_sse.o
PROG= minimap2
PROG_EXTRA= sdust
LIBS= -lm -lz -lpthread
@@ -48,5 +48,6 @@ ksw2_extz2_sse.o: ksw2.h
main.o: bseq.h minimap.h mmpriv.h
map.o: kthread.h kvec.h kalloc.h sdust.h mmpriv.h minimap.h bseq.h
misc.o: minimap.h ksort.h
patch.o: mmpriv.h minimap.h bseq.h kalloc.h
sdust.o: kalloc.h kdq.h kvec.h sdust.h
sketch.o: kvec.h kalloc.h minimap.h