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This commit is contained in:
Heng Li
2018-07-14 22:52:36 -04:00
parent 1a55227d5a
commit e5277dbf5c
4 changed files with 181 additions and 39 deletions
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main.c
+5 -1
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@@ -102,7 +102,7 @@ int main(int argc, char *argv[])
const char *opt_str = "2aSDw:k:K:t:r:f:Vv:g:G:I:d:XT:s:x:Hcp:M:n:z:A:B:O:E:m:N:Qu:R:hF:LC:yY";
mm_mapopt_t opt;
mm_idxopt_t ipt;
int i, c, n_threads = 3, long_idx;
int i, c, n_threads = 3, n_parts, long_idx;
char *fnw = 0, *rg = 0, *s;
FILE *fp_help = stderr;
mm_idx_reader_t *idx_rdr;
@@ -346,8 +346,12 @@ int main(int argc, char *argv[])
}
mm_idx_destroy(mi);
}
n_parts = idx_rdr->n_parts;
mm_idx_reader_close(idx_rdr);
if (opt.split_prefix)
mm_split_merge(argc - (optind + 1), (const char**)&argv[optind + 1], &opt, n_parts);
if (fflush(stdout) == EOF) {
fprintf(stderr, "[ERROR] failed to write the results\n");
exit(EXIT_FAILURE);