r894: added --max-qlen to filter out long query

This commit is contained in:
Heng Li
2018-12-12 12:27:32 -05:00
parent eef1cee9b7
commit ea2b1c5b2a
4 changed files with 14 additions and 2 deletions
+2
View File
@@ -107,6 +107,8 @@ typedef struct {
int sdust_thres; // score threshold for SDUST; 0 to disable
int flag; // see MM_F_* macros
int max_qlen; // max query length
int bw; // bandwidth
int max_gap, max_gap_ref; // break a chain if there are no minimizers in a max_gap window
int max_frag_len;