fixed the NM bug

due to reversed CIGAR
2026-09-28 17:48:12 +08:00 · 2017-06-25 11:24:39 -04:00
parent b261a4a74b
commit f20d550a59
2 changed files with 10 additions and 9 deletions
@@ -25,7 +25,7 @@ void mm_mapopt_init(mm_mapopt_t *opt)

 	opt->a = 1, opt->b = 1, opt->q = 1, opt->e = 1;
 	opt->zdrop = 100;
-	opt->min_ksw_len = 1000;
+	opt->min_ksw_len = 100;
 }

 void mm_mapopt_update(mm_mapopt_t *opt, const mm_idx_t *mi)