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r1272: support pass-1 junction processing

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NOT tested yet
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Heng Li
2025-04-12 23:15:04 -04:00
parent d930ea94ad
commit fb81e150f2
4 changed files with 125 additions and 59 deletions
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minimap.h
+1 -1
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@@ -5,7 +5,7 @@
#include <stdio.h>
#include <sys/types.h>
#define MM_VERSION "2.28-r1271-dirty"
#define MM_VERSION "2.28-r1272-dirty"
#define MM_F_NO_DIAG (0x001LL) // no exact diagonal hit
#define MM_F_NO_DUAL (0x002LL) // skip pairs where query name is lexicographically larger than target name