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ca6f4dc5e233db99eccea19a70976fe8dfbdf368
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8 Commits
Author SHA1 Message Date
Heng Li 819b3bf017 r1274: a little better pass-1 
Also fixed a bug in jump
 2025-04-13 13:55:15 -04:00
Heng Li bd03d975fc r1268: avoid extra small introns 2025-04-07 23:32:56 -04:00
Heng Li 75619c7b51 r1265: prefer spliced alignment 
mapq needs to be elevated
 2025-04-07 00:31:04 -04:00
Heng Li fbb9c0fcba r1264: added --jump-min-match, default to 3 
To match STAR
 2025-04-06 23:18:55 -04:00
Heng Li 54a4718c9b r1259: --jump-bed now functional 2025-04-06 17:12:49 -04:00
Heng Li dbc12b2838 r1258: update blen, mlen and dp_max0 2025-04-06 15:26:01 -04:00
Heng Li a8094ad859 r1256: working for one example, but still buggy 2025-04-06 10:33:57 -04:00
Heng Li 1877818239 r1255: moved jump code to a separate file 2025-04-06 09:33:51 -04:00