Heng Li beeb806829 r526: fixed a bug when HPC is in use ...

It happened when the query HPC minimizer is longer than the reference HPC
minimizer close to the beginning of a contig. We may get a negative coordinate,
which causes an assertion failure.

2017-10-21 19:54:04 -04:00

..

bioinfo.cls

removed subsubsection

2017-08-03 17:58:36 -04:00

blasr-mc.eval

added benchmark results

2017-08-01 15:12:49 -04:00

bowtie2-s3.sam.eval

replaced mapQ plot with sr roc

2017-10-19 23:43:17 -04:00

bwa-s3.sam.eval

replaced mapQ plot with sr roc

2017-10-19 23:43:17 -04:00

bwa.eval

added benchmark results

2017-08-01 15:12:49 -04:00

eval2roc.pl

backup

2017-08-02 19:52:31 -04:00

graphmap.eval

minor wording changes

2017-08-04 10:21:10 -04:00

hs38-simu.sh

r486: treat "U" as "T" for RNA reads (#33)

2017-10-07 18:53:25 -04:00

Makefile

backup

2017-08-02 19:52:31 -04:00

minialign.eval

added benchmark results

2017-08-01 15:12:49 -04:00

minimap2.bib

updated text (unfinished)

2017-10-20 12:44:54 -04:00

minimap2.tex

r524: reverted to bwa-mem end bonus

2017-10-20 16:57:31 -04:00

mm2-s3.sam.eval

r526: fixed a bug when HPC is in use

2017-10-21 19:54:04 -04:00

mm2.approx.eval

added benchmark results

2017-08-01 15:12:49 -04:00

mm2.eval

r526: fixed a bug when HPC is in use

2017-10-21 19:54:04 -04:00

natbib.bst

added tech notes

2017-08-01 10:38:33 -04:00

natbib.sty

added tech notes

2017-08-01 10:38:33 -04:00

ngmlr.eval

added benchmark results

2017-08-01 15:12:49 -04:00

roc.gp

replaced mapQ plot with sr roc

2017-10-19 23:43:17 -04:00

snap-s3.sam.eval

replaced mapQ plot with sr roc

2017-10-19 23:43:17 -04:00