mirror of
https://github.com/lh3/minimap2.git
synced 2026-09-25 09:28:12 +08:00
24 lines
473 B
C
24 lines
473 B
C
#ifndef MMPRIV2_H
|
|
#define MMPRIV2_H
|
|
|
|
#include "minimap.h"
|
|
|
|
#ifdef __cplusplus
|
|
extern "C" {
|
|
#endif
|
|
|
|
double cputime(void);
|
|
double realtime(void);
|
|
|
|
void radix_sort_128x(mm128_t *beg, mm128_t *end);
|
|
void radix_sort_64(uint64_t *beg, uint64_t *end);
|
|
uint32_t ks_ksmall_uint32_t(size_t n, uint32_t arr[], size_t kk);
|
|
|
|
int mm_chain_dp(int match_len, int max_dist, int bw, int max_skip, int min_sc, int n, mm128_t *a, uint64_t **_u, void *km);
|
|
|
|
#ifdef __cplusplus
|
|
}
|
|
#endif
|
|
|
|
#endif
|