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fix memory leak

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chhylp123
2021-02-13 23:58:39 -05:00
parent 18086e2c2e
commit 02fa015e28
3 changed files with 22 additions and 6 deletions
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hic.cpp
+5 -4
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@@ -444,7 +444,7 @@ void hc_pt_t_gen_single(hc_pt1_t* pt, uint64_t* up_bound)
int write_hc_pt_index(ha_ug_index* idx, char* file_name)
{
char* gfa_name = (char*)malloc(strlen(file_name)+25);
sprintf(gfa_name, "%s.hc_tlb", file_name);
sprintf(gfa_name, "%s.hic.tlb.bin", file_name);
FILE* fp = fopen(gfa_name, "w");
if (!fp) {
free(gfa_name);
@@ -481,7 +481,7 @@ int load_hc_pt_index(ha_ug_index** r_idx, char* file_name)
uint64_t flag = 0;
double index_time = yak_realtime();
char* gfa_name = (char*)malloc(strlen(file_name)+25);
sprintf(gfa_name, "%s.hc_tlb", file_name);
sprintf(gfa_name, "%s.hic.tlb.bin", file_name);
FILE* fp = fopen(gfa_name, "r");
if (!fp) {
free(gfa_name);
@@ -2142,6 +2142,7 @@ void destory_pdq(pdq* q)
{
kv_destroy(q->x);
kv_destroy(q->dis);
kv_destroy(q->vis);
}
void reset_pdq(pdq* q)
@@ -2889,7 +2890,7 @@ int load_hc_links(hc_links* link, const char *fn)
void write_hc_hits(kvec_pe_hit* hits, const char *fn)
{
char *buf = (char*)calloc(strlen(fn) + 25, 1);
sprintf(buf, "%s.hic.lk", fn);
sprintf(buf, "%s.hic.lk.bin", fn);
FILE* fp = fopen(buf, "w");
fwrite(&hits->a.n, sizeof(hits->a.n), 1, fp);
@@ -2903,7 +2904,7 @@ int load_hc_hits(kvec_pe_hit* hits, const char *fn)
{
uint64_t flag = 0;
char *buf = (char*)calloc(strlen(fn) + 25, 1);
sprintf(buf, "%s.hic.lk", fn);
sprintf(buf, "%s.hic.lk.bin", fn);
FILE* fp = NULL;
fp = fopen(buf, "r");