xxay/hifiasm
1
0
Fork 0
mirror of https://github.com/chhylp123/hifiasm.git synced 2026-10-10 06:40:56 +08:00
Code Issues Packages Projects Releases Wiki Activity

r317

Browse Source
This commit is contained in:
chhylp123
2021-03-27 02:46:48 -04:00
parent 24a19d7976
commit 0605aa1961
6 changed files with 371 additions and 209 deletions
Download Patch File Download Diff File Expand all files Collapse all files
hic.h
+2 -1
View File
@@ -62,11 +62,12 @@ void get_bubbles(bubble_type* bub, uint64_t id, uint32_t* beg, uint32_t* sink, u
int load_hc_links(hc_links* link, const char *fn);
void write_hc_links(hc_links* link, const char *fn);
void destory_bubbles(bubble_type* bub);
void identify_bubbles(ma_ug_t* ug, bubble_type* bub, uint8_t *het_flag);
void identify_bubbles(ma_ug_t* ug, bubble_type* bub, uint8_t *r_het_flag);
void resolve_bubble_chain_tangle(ma_ug_t* ug, bubble_type* bub);
uint32_t connect_bub_occ(bubble_type* bub, uint32_t root_id, uint32_t check_het);
void get_bub_id(bubble_type* bub, uint32_t root, uint64_t* id0, uint64_t* id1, uint32_t check_het);
void update_bubble_chain(ma_ug_t* ug, bubble_type* bub, uint32_t is_middle, uint32_t is_end);
void set_b_utg_weight_flag(bubble_type* bub, buf_t* b, uint32_t v, uint8_t* vis_flag, uint32_t flag, uint32_t* occ);
uint32_t get_unitig_het_arb(ma_utg_t* u, uint8_t *r_het_flag, uint32_t m_het_label, uint32_t p_het_label, uint32_t n_het_label);
#endif