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chhylp123
2020-10-26 11:01:48 -04:00
parent b2b4624cea
commit 0cc02035c5
6 changed files with 390 additions and 6 deletions
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CommandLines.h
+7
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@@ -30,9 +30,11 @@ typedef struct {
char *fn_bin_yak[2];
char *fn_bin_list[2];
char *extract_list;
char *hic_files[2];
int extract_iter;
int thread_num;
int k_mer_length;
int hic_mer_length;
int mz_win;
int bf_shift;
double high_factor; // coverage cutoff set to high_factor*hom_cov
@@ -93,4 +95,9 @@ static inline int ha_opt_triobin(const hifiasm_opt_t *opt)
return ((opt->fn_bin_yak[0] && opt->fn_bin_yak[1]) || (opt->fn_bin_list[0] && opt->fn_bin_list[1]));
}
static inline int ha_opt_hic(const hifiasm_opt_t *opt)
{
return ((opt->hic_files[0] && opt->hic_files[1]));
}
#endif