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write to hifiasm read store

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Heng Li
2020-03-26 14:23:17 -04:00
parent c3bbaa8a39
commit 0dd927bdce
8 changed files with 91 additions and 67 deletions
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2
Process_Read.cpp
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@@ -590,7 +590,7 @@ void recover_UC_Read_RC(UC_Read* r, All_reads* R_INF, uint64_t ID)
}\
i++;}\
void compress_base(uint8_t* dest, char* src, uint64_t src_l, uint64_t** N_site_lis, uint64_t N_site_occ)
void ha_compress_base(uint8_t* dest, char* src, uint64_t src_l, uint64_t** N_site_lis, uint64_t N_site_occ)
{
///N_site_lis saves the pos of all Ns in this read
///N_site_lis[0] is the number of Ns