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S/L index&reads

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Haoyu Cheng
2019-05-16 21:14:50 -04:00
parent 3c5799aa1b
commit 17553e0a42
14 changed files with 297 additions and 5 deletions
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Process_Read.h
+3
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@@ -110,6 +110,9 @@ void compress_base(uint8_t* dest, char* src, uint64_t src_l, uint64_t** N_site_l
void init_UC_Read(UC_Read* r);
void recover_UC_Read(UC_Read* r, All_reads* R_INF, uint64_t ID);
void reverse_complement(char* pattern, uint64_t length);
void write_All_reads(All_reads* r, char* read_file_name);
void load_All_reads(All_reads* r, char* read_file_name);
void destory_All_reads(All_reads* r);
void Counting_block();
void destory_R_buffer_block(R_buffer_block* curr_sub_block);