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This commit is contained in:
Haoyu Cheng
2019-07-08 01:06:36 -04:00
parent 87873d6323
commit 1892b4d2db
6 changed files with 1315 additions and 940 deletions
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14
Hash_Table.cpp
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@@ -3,6 +3,7 @@
#include <stdint.h>
#include "Hash_Table.h"
#include "Process_Read.h"
#include "Correct.h"
#include <pthread.h>
pthread_mutex_t output_mutex;
@@ -715,6 +716,19 @@ inline void append_pos_to_Candidates_list(Candidates_list* candidates, ElemType*
candidates->length++;
}
void pre_filter_by_nearby(k_mer_pos* n_list, uint64_t n_length, uint64_t n_end_pos, uint8_t n_direction, UC_Read* g_read)
{
char* x_string = NULL;
char* y_string = NULL;
long long i = 0;
for (i = 0; i < n_length; i++)
{
/* code */
}
}
void test_single_list(Candidates_list* candidates, k_mer_pos* n_list, uint64_t n_lengh, uint64_t end_pos, uint64_t strand)
{