From 1bbca54d8d0797600a3a6ab8b23102a2491bb16b Mon Sep 17 00:00:00 2001
From: Heng Li <lh3@me.com>
Date: Mon, 6 Apr 2020 09:59:43 -0400
Subject: [PATCH] r205: resume versioning

---
 Assembly.cpp   | 1 -
 CommandLines.h | 2 +-
 Makefile       | 4 ++--
 3 files changed, 3 insertions(+), 4 deletions(-)

diff --git a/Assembly.cpp b/Assembly.cpp
index 2720c8e..72d211d 100644
--- a/Assembly.cpp
+++ b/Assembly.cpp
@@ -8,7 +8,6 @@
 #include "Hash_Table.h"
 #include "POA.h"
 #include "Correct.h"
-#include "Output.h"
 #include "htab.h"
 #include "kthread.h"
 
diff --git a/CommandLines.h b/CommandLines.h
index 7df0950..afbac74 100644
--- a/CommandLines.h
+++ b/CommandLines.h
@@ -3,7 +3,7 @@
 
 #include <pthread.h>
 
-#define HA_VERSION "0.3.0-dirty-r201"
+#define HA_VERSION "0.3.0-dirty-r205"
 
 #define VERBOSE 0
 
diff --git a/Makefile b/Makefile
index 03a513e..67ae5ac 100644
--- a/Makefile
+++ b/Makefile
@@ -2,7 +2,7 @@ CXX=		g++
 CXXFLAGS=	-g -O3 -msse4.2 -mpopcnt -fomit-frame-pointer -Wall
 CPPFLAGS=
 INCLUDES=
-OBJS=		Output.o CommandLines.o Process_Read.o Assembly.o Hash_Table.o \
+OBJS=		CommandLines.o Process_Read.o Assembly.o Hash_Table.o \
 			POA.o Correct.o Levenshtein_distance.o Overlaps.o Trio.o kthread.o Purge_Dups.o \
 			htab.o hist.o sketch.o anchor.o sys.o
 EXE=		hifiasm
@@ -34,7 +34,7 @@ depend:
 
 Assembly.o: Assembly.h CommandLines.h Process_Read.h Overlaps.h kvec.h kdq.h
 Assembly.o: Hash_Table.h htab.h POA.h Correct.h Levenshtein_distance.h
-Assembly.o: Output.h
+Assembly.o: kthread.h
 CommandLines.o: CommandLines.h ketopt.h
 Correct.o: Correct.h Hash_Table.h htab.h Process_Read.h Overlaps.h kvec.h
 Correct.o: kdq.h CommandLines.h Levenshtein_distance.h POA.h Assembly.h