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chhylp123
2021-04-14 18:50:20 -04:00
parent 67c7218264
commit 1e86e3dc02
7 changed files with 845 additions and 178 deletions
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rcut.h
+5 -1
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@@ -16,8 +16,12 @@ typedef struct {
#define mc_node_t int8_t
// #define w_t int32_t
// #define t_w_t int64_t
// #define w_cast(x) ((t_w_t)((x) < 0 ? (x) - 0.5 : (x) + 0.5))
#define w_t double
#define t_w_t double
#define w_cast(x) ((t_w_t)((x)))
typedef struct {
uint64_t x; ///(uint64_t)nid1 << 32 | nid2;
@@ -38,5 +42,5 @@ typedef struct {
mc_match_t* e;
}mc_g_t;
void mc_solve(hap_overlaps_list* ovlp, trans_chain* t_ch, kv_u_trans_t *ta, ma_ug_t *ug, asg_t *read_g, double f_rate, uint8_t* trio_flag);
void mc_solve(hap_overlaps_list* ovlp, trans_chain* t_ch, kv_u_trans_t *ta, ma_ug_t *ug, asg_t *read_g, double f_rate, uint8_t* trio_flag, uint32_t renew_s, int8_t *s, uint32_t is_sys);
#endif