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Haoyu Cheng
2019-12-23 09:37:26 -05:00
parent 06556e4a9b
commit 1ead2d3081
8 changed files with 1751 additions and 176 deletions
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Correct.h
+4
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@@ -1447,6 +1447,10 @@ void append_k_mer_pos_list_alloc_prefilter(k_mer_pos_list_alloc* list, k_mer_pos
uint64_t n_end_pos, uint8_t n_direction, UC_Read* g_read, All_reads* R_INF, Correct_dumy* dumy);
/**********************for prefilter************************ */
int verify_single_window(long long x_start, long long x_end,
long long overlap_x_s, long long overlap_y_s, int x_id,
int y_id, int y_strand, char* x_buffer, char* y_buffer,
All_reads* R_INF);
void init_Cigar_record_alloc(Cigar_record_alloc* x);
void resize_Cigar_record_alloc(Cigar_record_alloc* x, long long new_size);