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Merge branch 'master' into dev-lh3
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@@ -1599,6 +1599,7 @@ hap_overlaps_list* all_ovlp)
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asg_arc_t t;
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asg_arc_t_offset t_offset;
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hap_candidates hap_can;
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memset(&hap_can, 0, sizeof(hap_candidates));
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hap_overlaps hap_align;
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xUid = Input_uId;
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if(nsg->seq[xUid].del || nsg->seq[xUid].c == ALTER_LABLE) return;
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@@ -2161,7 +2162,8 @@ void hap_alignment_worker(void *_data, long eid, int tid)
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int32_t r;
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asg_arc_t t;
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asg_arc_t_offset t_offset;
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hap_candidates hap_can;
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hap_candidates hap_can;
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memset(&hap_can, 0, sizeof(hap_candidates));
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hap_overlaps hap_align;
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xUid = Input_uId;
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if(nsg->seq[xUid].del || nsg->seq[xUid].c == ALTER_LABLE) return;
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