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phasing improvement

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chhylp123
2021-04-27 21:35:49 -04:00
parent 11430d6a3b
commit 2fc2268268
4 changed files with 403 additions and 37 deletions
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rcut.cpp
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@@ -2814,6 +2814,8 @@ void mc_solve(hap_overlaps_list* ovlp, trans_chain* t_ch, kv_u_trans_t *ta, ma_u
mc_opt_init(&opt, asm_opt.n_perturb, asm_opt.f_perturb, asm_opt.seed);
mc_g_t *mg = init_mc_g_t(ug, read_g, s, renew_s);
update_mc_edges(mg, ovlp, ta, t_ch, f_rate, is_sys);
fprintf(stderr, "[M::%s:: # edges: %u]\n", __func__, (uint32_t)mg->e->ma.n);
mb_solve_core(&opt, mg, ref, is_sys);
///debug_mc_g_t(mg);