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r257: dropped contained unitigs

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Heng Li
2020-06-08 15:43:21 -04:00
parent afa93e4bbb
commit 36bfb02298
4 changed files with 109 additions and 15 deletions
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CommandLines.h
+2 -1
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@@ -3,7 +3,7 @@
#include <pthread.h>
#define HA_VERSION "0.7-dirty-r255"
#define HA_VERSION "0.7-dirty-r257"
#define VERBOSE 0
@@ -15,6 +15,7 @@
#define HA_F_SKIP_TRIOBIN 0x20
#define HA_F_PURGE_CONTAIN 0x40
#define HA_F_PURGE_JOIN 0x80
#define HA_F_KEEP_CONTAINED 0x100
#define HA_MIN_OV_DIFF 0.02 // min sequence divergence in an overlap