better seeding

2026-10-07 13:18:11 +08:00 · 2021-08-22 09:53:34 -04:00
parent bfff640a82
commit 37b07e4d33
15 changed files with 637 additions and 406 deletions
@@ -4,7 +4,7 @@
 #include <pthread.h>
 #include <stdint.h>

-#define HA_VERSION "0.15.5-r358"
+#define HA_VERSION "0.15.5-r366"

 #define VERBOSE 0

@@ -46,6 +46,7 @@ typedef struct {
    int hic_mer_length;
    int bub_mer_length;
 	int mz_win;
+    int mz_rewin;
 	int mz_sample_dist;
 	int bf_shift;
 	int max_kmer_cnt;