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update readme for ont

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chhylp123
2025-01-31 20:27:22 -05:00
parent 2c77b3c87e
commit 4733ef5011
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README.md
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@@ -15,6 +15,9 @@ hifiasm -o CHM13.asm -t32 -l0 CHM13-HiFi.fa.gz 2> CHM13.asm.log
# Assemble heterozygous genomes with built-in duplication purging
hifiasm -o HG002.asm -t32 HG002-file1.fq.gz HG002-file2.fq.gz
# Assemble genomes with ONT R10 reads rather than PacBio HiFi reads using the latest release of hifiasm (>0.21.0-r686)
hifiasm -o HG002.asm --ont -t32 HG002-ont.fq.gz
# Hi-C phasing with paired-end short reads in two FASTQ files
hifiasm -o HG002.asm --h1 read1.fq.gz --h2 read2.fq.gz HG002-HiFi.fq.gz