From 4c873f9a66220adc770bc99f6cbdfee63499f5c4 Mon Sep 17 00:00:00 2001 From: chhylp123 Date: Sat, 24 Sep 2022 22:39:07 -0400 Subject: [PATCH] large extension --- Correct.h | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/Correct.h b/Correct.h index 7c3e3a3..c8cef1e 100644 --- a/Correct.h +++ b/Correct.h @@ -1324,6 +1324,10 @@ void inline resize_UC_Read(UC_Read *z, int64_t s) } } +void update_sketch_trace(overlap_region_alloc* ol, const ul_idx_t *uref, const ug_opt_t *uopt, +All_reads *rref, UC_Read* tu, asg64_v* idx, asg64_v *b0, asg64_v *b1, int64_t ql, int64_t wl, kv_ul_ov_t *aln, uint64_t rid); + +#define copy_asg_arr(des, src) ((des).a = (src).a, (des).n = (src).n, (des).m = (src).m) #define FORWARD_KSW 0 #define BACKWARD_KSW 1