init partition

2026-10-05 00:48:12 +08:00 · 2020-12-26 19:01:24 -05:00
parent f3e390eee8
commit 53a655d802
7 changed files with 1887 additions and 183 deletions
@@ -67,6 +67,7 @@ typedef struct {
    int purge_level_primary;
    int purge_level_trio;
    int purge_overlap_len;
+    int purge_overlap_len_hic;
    int recover_atg_cov_min;
    int recover_atg_cov_max;
    int hom_global_coverage;
@@ -76,6 +77,7 @@ typedef struct {
    float min_drop_rate;
    float max_drop_rate;
    float purge_simi_rate;
+    float purge_simi_rate_hic;

    long long small_pop_bubble_size;
    long long large_pop_bubble_size;