From 55f95c0191d57aa4c0fa138e1d694e40c7eb98b5 Mon Sep 17 00:00:00 2001 From: chhylp123 Date: Wed, 26 Aug 2020 00:25:42 -0400 Subject: [PATCH] fix typo --- Assembly.cpp | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/Assembly.cpp b/Assembly.cpp index 48ae9c5..f22c685 100644 --- a/Assembly.cpp +++ b/Assembly.cpp @@ -584,6 +584,8 @@ static void worker_ovec(void *data, long i, int tid) R_INF.paf[i].is_abnormal = abnormal; R_INF.trio_flag[i] = AMBIGU; + + ///need to be fixed in r305 // if(ha_idx_hp == NULL) // { // R_INF.trio_flag[i] += collect_hp_regions(&b->olist, &R_INF, &(b->k_flag), RESEED_HP_RATE, Get_READ_LENGTH(R_INF, i), NULL); @@ -682,6 +684,8 @@ static void worker_ovec_related_reads(void *data, long i, int tid) } R_INF.trio_flag[i] = AMBIGU; + + ///need to be fixed in r305 // if(ha_idx_hp == NULL) // { // R_INF.trio_flag[i] += collect_hp_regions(&b->olist, &R_INF, &(b->k_flag), RESEED_HP_RATE, Get_READ_LENGTH(R_INF, i), R_INF_FLAG.fp);