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chhylp123
2021-06-13 17:35:09 -04:00
parent 7e06dec2d0
commit 5b0a0c85ef
2 changed files with 137 additions and 10 deletions
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Overlaps.cpp
+6 -6
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@@ -13295,12 +13295,12 @@ long long gap_fuzz, bub_label_t* b_mask_t)
if(t_ch) destory_trans_chain(&t_ch);
// char* gfa_name = (char*)malloc(strlen(output_file_name)+50);
// sprintf(gfa_name, "%s.after.clean_d_utg.noseq.gfa", output_file_name);
// FILE* output_file = fopen(gfa_name, "w");
// ma_ug_print_simple(ug, sg, coverage_cut, sources, ruIndex, "utg", output_file);
// fclose(output_file);
// free(gfa_name);
char* gfa_name = (char*)malloc(strlen(output_file_name)+50);
sprintf(gfa_name, "%s.after.clean_d_utg.noseq.gfa", output_file_name);
FILE* output_file = fopen(gfa_name, "w");
ma_ug_print_simple(ug, sg, coverage_cut, sources, ruIndex, "utg", output_file);
fclose(output_file);
free(gfa_name);
ma_ug_destroy(ug);
kv_destroy(new_rtg_edges.a);