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extend ed alignment

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chhylp123
2022-09-13 17:29:27 -04:00
parent ee51a6dddc
commit 5da05f308f
11 changed files with 2348 additions and 111 deletions
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inter.h
+1 -1
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@@ -26,7 +26,7 @@ typedef struct {
int min_gc_cnt, min_gc_score, sub_diff, best_n;
float chn_pen_gap, mask_level, pri_ratio;
///base-alignment
double bw_thres, diff_ec_ul, diff_ec_ul_low; int max_n_chain, ec_ul_round;
double bw_thres, diff_ec_ul, diff_ec_ul_low, diff_ec_ul_hpc; int max_n_chain, ec_ul_round;
} mg_idxopt_t;
struct mg_tbuf_s {