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chhylp123
2020-02-07 15:00:14 -05:00
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## Introduction ## Introduction
Hifiasm is a fast haplotype-reserved de novo assembler for PacBio Hifiasm is a fast haplotype-resolved de novo assembler for PacBio
Hifi reads. Unlike most existing assemblers, hifiasm starts from uncollapsed Hifi reads. Unlike most existing assemblers, hifiasm starts from uncollapsed
genome. Thus, it is able to keep the haplotype information as much as possible. genome. Thus, it is able to keep the haplotype information as much as possible.
The input of hifiasm is the PacBio Hifi reads in fasta/fastq format, and its The input of hifiasm is the PacBio Hifi reads in fasta/fastq format, and its