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resolve conflicts

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chhylp123
2021-07-27 20:11:22 -04:00
parent 0c81c341d5
commit 6ea66e1290
4 changed files with 4 additions and 22 deletions
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anchor.cpp
+2 -1
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@@ -255,7 +255,8 @@ kvec_t_u64_warp* chain_idx, void *ha_flt_tab, ha_pt_t *ha_idx, overlap_region* f
ab->mz.n = 0, ab->n_a = 0;
// get the list of anchors
ha_sketch_query(u->s, u->len, asm_opt.mz_win, asm_opt.k_mer_length, 0, !(asm_opt.flag & HA_F_NO_HPC), &ab->mz, ha_flt_tab, k_flag, dbg_ct);
//should use the new version...
///ha_sketch_query(u->s, u->len, asm_opt.mz_win, asm_opt.k_mer_length, 0, !(asm_opt.flag & HA_F_NO_HPC), &ab->mz, ha_flt_tab, k_flag, dbg_ct);
// minimizer of queried read
if (ab->mz.m > ab->old_mz_m) {
ab->old_mz_m = ab->mz.m;