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working on mid-sized test example

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Heng Li
2020-03-27 16:55:28 -04:00
parent bd89bd500c
commit 7079a9f306
2 changed files with 2 additions and 5 deletions
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Correct.cpp
-3
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@@ -7213,8 +7213,6 @@ void correct_overlap(overlap_region_alloc* overlap_list, All_reads* R_INF,
haplotype_evdience_alloc* hap, Round2_alignment* second_round,
int force_repeat, int is_consensus, int* fully_cov, int* abnormal)
{
reverse_complement(g_read->seq, g_read->length);
clear_Correct_dumy(dumy, overlap_list);
long long window_start, window_end;
@@ -7261,7 +7259,6 @@ void correct_overlap(overlap_region_alloc* overlap_list, All_reads* R_INF,
(*fully_cov) = check_if_fully_covered(overlap_list, R_INF, g_read, dumy, g, abnormal);
}